A. Books

Adam Drozdek

Data structures and algorithms in C++, Beijing: Tsinghua University Press, [Chinese translation], (2006).

Data structures and algorithms in Java, Beijing: China Machine Press, [Chinese translation], (2006).

Data structures and algorithms in C++, Boston: Course Technology (3rd edition), (2005).

Data structures and algorithms in Java, Boston: Course Technology (2nd edition), (2005).

Elements of data compression, Warszawa: WNT 1999; Pacific Grove: Brooks/Cole (2002).

Jeff Jackson

Web Technologies: A Computer Science Perspective, Upper Saddle River, NJ: Pearson Prentice Hall (2007).

Patrick Juola

Principles of Computer Organization and Assembly Language Using the Java Virtual Machine, Upper Saddle River, NJ: Pearson Prentice Hall, (2007).

B. Articles and Book Chapters

Adam Drozdek

"Frank on beauty", Idea 18, 109-119 (2006).

"Anaxagoras and the everything in everything principle", Hermes 133, 163-177 (2005).

"Sceptics and a religious instinct", Minerva 18, 93-108 (2005).

"Protagoras and instrumentality of religion", L'Antiquité Classique 74, 41-50 (2005).

"Worst case for comb sort", Informatyka Teoretyczna i Stosowana 5(9), 23-28 (2005).

Jeff Jackson

"On Learning Random DNF Formulas under the Uniform Distribution" (with R. A. Servedio), Theory of Computing 2, 147-172 (2006).

"Uniform-Distribution Learnability of Noisy Linear Threshold Functions with Restricted Focus of Attention", Proceedings of the 19th Annual Workshop on Computational Learning Theory, 304-318 (2006).

"Exploring learnability between exact and PAC" (with N. Bshouty and T. Tamon), Journal of Computer and System Sciences 70(4), 471-484 (2005).

"Learning Random log-depth Decision Trees under the Uniform Distribution" (with R. A. Servedio), SIAM Journal on Computing 34(5), 1107-1128 (2005).

"More Efficient PAC-learning of DNF with Membership Queries Under the Uniform Distribution" (with N. Bshouty and T. Tamon), Journal of Computer and System Sciences 68(1), 205-234 (2004).

"Preference Elicitation and Query Learning" (with A. Blum, T. Sandholm, and M. Zinkevich), Journal of Machine Learning Research 5: 649-667 (2004).

Patrick Juola

"Authorship Attribution for Electronic Documents", in International Federation for Information Processing Series in Computer Science, Olivier & Shenoi (Eds.), 222:119-130, (2006).

"A Prototype for Authorship Attribution Software" (with Sofko, John and Brennan, Patrick), Literary and Linguistic Computing, 21:169-178, (2006).

"Encapsulating Architecture and Encapsulating Processes", Behavioral and Brain Sciences 25(6), 759-759 (2003).

"One Word, One Module?", Cortex 39(1), 135-137 (2003).

"The Time Course of Language Change", Computers and the Humanities 37(1), 77-96 (2003).

Donald Simon

Comment on "Phylogenetic MCMC Algorithms Are Misleading on Mixtures of Trees", (with Ronquist, F., Larget B., Huelsenbeck, P., Kadane, J., van der Mark, P), in Science, 312, p. 367, (April 2006).

"A Bayesian approach to the estimation of ancestral genome arrangements", (with Larget, B. and Kadane, J.), , in Molecular Phylogenetics and Evolution, 36, Issue 2, 214-223, (August 2005).

"A Bayesian analysis of metazoan mitochondrial genome arrangements", (with Larget, B., Kadane J., Sweet, D.), in Molecular Biology and Evolution, 22, 486-495, (March 2005).

"On a Bayesian approach to phylogenetic inference from animal mitochondrial genome arrangements" (with B. Larget and J. Kadane), Journal of the Royal Statistical Society B 64, 681-693 (2002).

"Phylogenetic inference from mitochondrial genome arrangement data" (with B. Larget), in Computational Science - ICCS 2001. Springer-Verlag Lecture Notes in Computer Science, 2074, 1022-1028 (2001).

C. Software

Donald Simon

"Bayesian Analysis to Describe Genomic Evolution by Rearrangement (BADGER)" (with B. Larget) Version 1.01 beta, (April 21, 2004).

"Bayesian Analysis in Molecular Biology and Evolution (BAMBE)" (with B. Larget), version 2.03, (May 2001).

D. Presentations

Jeff Jackson

"Uniform-Distribution Learnability of Noisy Linear Threshold Functions with Restricted Focus of Attention", 19th Annual Conference on Learning Theory, Carnegie Mellon University, (June 23, 2006).

"Average-Case Learnability", Mathematics and Computer Science Department Seminar, Clarkson University, (March 2005).

"Harmonic Analysis in Learning Theory", Yale Workshop on Discrete Mathematics and Theoretical Computer Science (invited participant), Yale University, (September 2004).

"On Quantum Learning of Small DNF Functions", SIAM Conference on Computational Science and Engineering, San Diego, CA, (February 2003).

"Exploring Learnability Between Exact and PAC", 15th Annual Conference on Computational Learning Theory, The University of New South Wales, Sydney, Australia, (2002).

"On the Efficiency of Noise-Tolerant PAC Algorithms Derived from Statistical Queries", 13th Annual Conference on Computational Learning Theory, Stanford University, (June 2000).

Patrick Juola

"Future Trends in Authorship Attribution", Third Annual Conference of the IFIP Working Group 11.9, Orlando, FL, (January 2007).

"Context-Sensitive Computer-Aided Index Generator", (with Lukon, Shelly (presenter)), Digital Humanities 2006, Paris, France, (July 2006).

"Killer Applications in Digital Humanities", Digital Humanities 2006, Paris, France, (July 2006).

"Towards an Automatic Index Generation Tool", Canadian Symposium for Text Analysis (CaSTA-04) "The Face of Text", Hamilton, Ontario, Canada. (November 2004).

"Proving and Improving Authorship Attribution" (with J. Sofko), Canadian Symposium for Text Analysis (CaSTA-04) "The Face of Text", Hamilton, Ontario, Canada. (November 2004).

"On Composership Attribution", Proceedings of the 2004 Joint Annual Conference of the Association for Literary and Linguistic Computing and the Association for Computers and the Humanities (ALLC/ACH 2004). Goteborg, Sweden, (June 2004).

"Ad-hoc Authorship Attribution Competition", Proceedings of ALLC/ACH 2004. Goteborg, Sweden, (June 2004).

"Becoming Jack London", Proceedings of the Fifth International Conference on Quantitative Linguistics (QUALICO-2003), Athens, GA, (May 2003).

"A Controlled-Corpus Experiment in Authorship Identification by Cross-Entropy", (wth H. Baayen) Proceedings of ACH/ALLC 2003, Athens, GA, (May 2003).

"Temporal Factors Underlying Linguistic Change", 2003 Annual Meeting of the Linguistic Society of America, Atlanta, GA, (January 2003).

Donald Simon

"Phylogenetic Inference from Mitochondrial Genome Arrangement Data", (with Bret Larget). 2001 International Conference on Computational Science, San Francisco, CA, (May 2001).

E. Grants

Jeff Jackson

"Fourier Analysis of Learning Problems and Function Classes", National Science Foundation, September 2002-August 2006.

Amount awarded: $200,567.

Patrick Juola

Faculty/Student Research Grant, McAnulty College, Spring 2007.

Amount awarded: $500.

"A Model of Aphasia using Dictionary-Derived Natural Language Semantics", Oxford University Press. Supported by provision of research corpora from the Digial Reference library. (2003).

Lili Shashaani

"Diversity in Computation Technology", Alcoa Foundation, 2006-2007 academic year and summer 2007.

Amount awarded: $20,000.

"Increasing the Participation and Achievement of Female and Minority Students in Computer Science", Wimmer Family Foundation grant, summer 2007.

Amount awarded: $3,500.

Donald Simon

"Improving Bayesian Phylogeny" with B. Larget and D. Baum (U. of Wisconsin at Madison), J. Kadane and M. Derthick (Carnegie Mellon U.) from the National Institutes of Health, June 2003 - May 2008.

Amount awarded: $1,449,570.

F. Scholarly Service and Activities

Jeff Jackson

Member, Board of Directors, Association for Computational Learning (2004-present)

Reviewer for Learning Theory track, Conference on Neural Information Processing Systems, 2006.

Patrick Juola

Founding Member, Digital Humanities Development Consortium (2003-present)

Program Committee, QUALICO-2003

Member, NSF Review Panel, Information Technology Research "medium", text and multilingual processing, May 2003

International Quantitative Linguistics Association (Member-at-Large of Executive Board, 2000-present)

International Steering Committee, New Methods in Language Processing (Member, 1999-present)